Difference between revisions of "3.5.3 Minimum reporting guidelines"

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(Created page with "== ​​​A. Background & Definitions == To be added == B. Guidance & Expectations == To be added '''RISK ASSESSMENT''' To be added '''PLEASE DO NOT FORGET''' To be ad...")
 
 
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== ​​​A. Background & Definitions ==
 
== ​​​A. Background & Definitions ==
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To be added
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The purpose of the different Minimum Information (MI) guidelines is to ensure the data generated using the respective method or technique can be easily verified, analyzed and interpreted by the wider scientific community.
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Ultimately, MI standards should ensure that information generated by using certain methods should be structured and organised in a way that facilitates data sharing, the verification of results and the re-use of data.
  
 
== B. Guidance & Expectations ==
 
== B. Guidance & Expectations ==
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To be added
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The concept of ‘Minimum Information’ standards was first introduced in 2001 by developing and publishing the MIAME (Minimum Information’ about a microarray experiment) guidelines. Here the authors provided detailed guidance on what information, specifications and meta data about an microarray experiment is crucial and important to be reported - so that any data sets generated can be used to their full potential and readers obtain a comprehensive understanding of the published experiment.
  
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== C. Resources ==
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An overview of developed MI guidelines is provided by the FAIRsharing.org website (https://fairsharing.org/) with the possibility to search for specific techniques or methods of interest.
  
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'''RISK ASSESSMENT'''
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* [https://doi.org/10.25504/FAIRsharing.8vv5fc Minimum Information About a Proteomics Experiment (MIAPE)]
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To be added
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* [https://doi.org/10.25504/FAIRsharing.28yec8 Minimum Information About a Bioinformatics investigation (MIABi)]
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* [https://doi.org/10.25504/FAIRsharing.my19zk Minimum Information About a RNAi Experiment (MIARE)]
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* [https://doi.org/10.25504/FAIRsharing.kcnjj2 Minimum Information about Flow Cytometry (MIFlowCyt)]
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'''PLEASE DO NOT FORGET'''
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* [https://doi.org/10.25504/FAIRsharing.gt5caz Minimum Information about a Protein Affinity Reagent (MIAPAR)]
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To be added
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* [https://doi.org/10.25504/FAIRsharing.c2e4ab Minimum Information about Tissue Imaging (MITI)]
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* [https://doi.org/10.25504/FAIRsharing.vh2ye1 Minimum Information About Cell Migration Experiment (MIACME)]
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== C. Resources ==
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* [https://doi.org/10.25504/FAIRsharing.5pp7gn Minimum Information about a Neuroscience Investigation (MINI)]
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To be added
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* [https://fairsharing.org/4183 Minimum Information Standard for Engineered Organism Experiments (MIEO)]
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* [https://doi.org/10.25504/FAIRsharing.IjUe3j Minimum Information about Peptide Array Experiment (MIAPepAE)]
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* [https://doi.org/10.25504/FAIRsharing.ht22t4 Minimum Information Specification For In Situ Hybridization and Immunohistochemistry Experiments (MISFISHIE)]
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* [https://doi.org/10.25504/FAIRsharing.wz1w7t Minimum Information About a Spinal Cord Injury experiment (MIASCI)]
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* [https://doi.org/10.25504/FAIRsharing.jw7rq3 Minimum Information for Reporting Next Generation Sequencing Genotyping (MIRING)]
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* [https://doi.org/10.25504/FAIRsharing.sbfp9e Minimum Information Required for A Glycomics Experiment - Glycan Microarray Analysis (MIRAGE Glycan Microarray Analysis)]
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* [https://doi.org/10.25504/FAIRsharing.mxz4jy Minimum Information for Publication of Quantitative Real-Time PCR Experiments (MIQE)]
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* [https://doi.org/10.25504/FAIRsharing.n7src9 Minimum Information Required for A Glycomics Experiment - Mass Spectrometric Analysis (MIRAGE MS)]
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* [https://doi.org/10.25504/FAIRsharing.jbg4kp Minimum Information Required for a Drug Metabolism Enzymes and Transporters Experiment (MIDE)]
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* [https://doi.org/10.25504/FAIRsharing.9mfexc Minimum Information About a Genotyping Experiment (MIGen)]
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* [https://doi.org/10.25504/FAIRsharing.zj6y9h Minimum Information About a Simulation Experiment (MIASE)]
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* [https://doi.org/10.25504/FAIRsharing.dt7hn8 Minimum Information About a Bioactive Entity (MIABE)]
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* [https://doi.org/10.25504/FAIRsharing.32b10v Minimum Information About a Microarray Experiment (MIAME)]
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* [https://doi.org/10.25504/FAIRsharing.bbb81t Minimum Information about a Stem Cell Experiment (MISCE)]
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* [https://doi.org/10.25504/FAIRsharing.8z3xzh Minimum Information about a Molecular Interaction Experiment (MIMIx)]
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* [https://doi.org/10.25504/FAIRsharing.wYScsE Minimum Information about Animal Toxicology Experiments In Vivo (MIATE/invivo)]
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* [https://doi.org/10.25504/FAIRsharing.x7nef0 Minimum Information Model for Dielectric Measurements of Biological Tissues (MINDER)]
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* [https://doi.org/10.25504/FAIRsharing.7d0yv9 Minimal Information About a Cellular Assay (MIACA)]
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* [https://doi.org/10.25504/FAIRsharing.ca48xs Minimal Information About a Phylogenetic Analysis (MIAPA)]
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* [https://doi.org/10.25504/FAIRsharing.a55z32 Minimal Information about a high throughput SEQuencing Experiment (MINSEQE)]
  
 
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Latest revision as of 12:35, 15 June 2023

​​​A. Background & Definitions

The purpose of the different Minimum Information (MI) guidelines is to ensure the data generated using the respective method or technique can be easily verified, analyzed and interpreted by the wider scientific community. Ultimately, MI standards should ensure that information generated by using certain methods should be structured and organised in a way that facilitates data sharing, the verification of results and the re-use of data.

B. Guidance & Expectations

The concept of ‘Minimum Information’ standards was first introduced in 2001 by developing and publishing the MIAME (Minimum Information’ about a microarray experiment) guidelines. Here the authors provided detailed guidance on what information, specifications and meta data about an microarray experiment is crucial and important to be reported - so that any data sets generated can be used to their full potential and readers obtain a comprehensive understanding of the published experiment.

C. Resources

An overview of developed MI guidelines is provided by the FAIRsharing.org website (https://fairsharing.org/) with the possibility to search for specific techniques or methods of interest.

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